Development and validation of an LC-MS/MS method for the simultaneous detection of urinary inflammatory biomarkers in a Flemish birth cohort
2025Journal of Chromatography B
Project Manager · Bioinformatics, AI & Data Science
VIB-KULeuven Center for Microbiology · Leuven, Belgium
Development and validation of an LC-MS/MS method for the simultaneous detection of urinary inflammatory biomarkers in a Flemish birth cohort
2025Journal of Chromatography B
Chemical exposure in childhood: A study on organophosphate flame retardants and plasticizers in a Flemish birth cohort
2025Environmental Research
Dietary convergence induces individual responses in faecal microbiome composition
2025eGastroenterology
Elevated serum levels of interleukin-18 discriminate Still’s disease from other autoinflammatory conditions: results from the European ImmunAID cohort
2025RMD Open
Means and methods to classify the gut microbiome
2025Patent · WO2025125682
Beyond the Norm: epidemiology of irritable bowel syndrome and mental health among sexual and gender-diverse young adults in a large representative cohort
2024Gastroenterology
Associations of HIV and iron status with gut microbiota composition, gut inflammation, and gut integrity in South African school-age children: A two-way factorial case-control study
2023Journal of Human Nutrition and Dietetics
Mood disorders in higher education in Flanders during the 2nd COVID-19 wave: Prevalence and help-seeking: Findings from the Flemish College Surveys (FLeCS)
2023Journal of Psychiatric Research
Long-term life history predicts current gut microbiome in a population-based cohort study
2022Nature Aging
High-energy level metabolism and transport revealed at the transition from close to open flowers
2022Plant Physiology
The effect of ß-glucan prebiotic on kidney function, uremic toxins and gut microbiome in stage 3 to 5 chronic kidney disease (CKD) predialysis participants: a randomized controlled trial
2022Nutrients
The effect of oral iron supplementation on the gut microbiota, gut inflammation, and iron status in iron-depleted South African school-age children with virally suppressed HIV and without HIV
2022European Journal of Nutrition
Means and methods to diagnose gut flora dysbiosis and inflammation
2022Patent · WO2022073973A1
Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco
2021Science Advances
Comparative transcriptomic analysis reveals conserved transcriptional programs underpinning organogenesis and reproduction in land plants
2021Nature Plants
Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily
2021Plant Physiology
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
2020Nature
A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana
2019Cellular and Molecular Life Sciences
Appropriate thiamin pyrophosphate levels are required for acclimation to changes in photoperiod
2019Plant Physiology
Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida
2019Nature Communications
Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells
2019Plant Reproduction
Multi‐tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome
2018The Plant Journal
CoNekT: an open-source framework for comparative genomic and transcriptomic network analyses
2018Nucleic Acids Research
PhytoNet: Comparative co-expression network analyses across phytoplankton and land plants
2018Nucleic Acids Research
AtRsgA from Arabidopsis thaliana controls maturation of the small subunit of the chloroplast ribosome
2018The Plant Journal
LSTrAP: efficiently combining RNA sequencing data into co-expression networks
2017BMC Bioinformatics
Expression atlas and comparative co-expression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon
2017New Phytologist
Phylogenomic analysis of gene co-expression networks reveals evolution of functional modules
2017The Plant Journal
Beyond genomics: studying evolution with gene networks
2017Trends in Plant Science
PlaNet: Comparative Co-Expression Network Analyses for Plants
2017Plant Genomics Databases (Book Chapter)
Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana
2017New Phytologist
Tools of the trade: studying molecular networks in plants
2016Current Opinion in Plant Biology
Growth-regulating factors (GRFs): a small transcription factor family with important functions in plant biology
2015Molecular Plant
The genome sequence of the orchid Phalaenopsis equestris
2015Nature Genetics
PLAZA 3.0: an access point for plant comparative genomics
2014Nucleic Acids Research
Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences
2014Journal of Experimental Botany
TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes
2013Genome Biology
FLOWERING LOCUS C in monocots and the tandem origin of angiosperm-specific MADS-box genes
2013Nature Communications
Gamma paleohexaploidy in the stem lineage of core eudicots: significance for MADS-Box gene and species diversification
2012Molecular Biology and Evolution
Dissecting plant genomes with the PLAZA comparative genomics platform
2012Plant Physiology
i-ADHoRe 3.0 - fast and sensitive detection of genomic homology in extremely large data sets
2012Nucleic Acids Research
The Medicago genome provides insight into the evolution of rhizobial symbioses
2011Nature
Journey through the past: 150 million years of plant genome evolution
2011The Plant Journal
A greedy, graph-based algorithm for the alignment of multiple homologous gene lists
2011Bioinformatics
The genome of the domesticated apple (Malus x domestica Borkh.)
2010Nature genetics
The flowering world: a tale of duplications
2009Trends in Plant Science
PLAZA: a comparative genomics resource to study gene and genome evolution in plants
2009The Plant Cell
Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression
2009BMC Genomics
* These authors contributed equally.